HL_7R4X_034
3D structure
- PDB id
- 7R4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- AUUGCAAUUAU(PSU)
- Length
- 12 nucleotides
- Bulged bases
- 7R4X|1|2|U|1621, 7R4X|1|2|U|1622, 7R4X|1|2|A|1623||A
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7R4X_034 not in the Motif Atlas
- Homologous match to HL_8C3A_224
- Geometric discrepancy: 0.2286
- The information below is about HL_8C3A_224
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.2
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7R4X|1|2|A|1614
7R4X|1|2|U|1615
7R4X|1|2|U|1616
7R4X|1|2|G|1617
7R4X|1|2|C|1618
7R4X|1|2|A|1619
7R4X|1|2|A|1620
7R4X|1|2|U|1621
7R4X|1|2|U|1622
7R4X|1|2|A|1623||A
7R4X|1|2|U|1624
7R4X|1|2|PSU|1625
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain P
- 40S ribosomal protein S15
- Chain S
- 40S ribosomal protein S18
- Chain T
- 40S ribosomal protein S19
- Chain d
- 40S ribosomal protein S29
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