HL_7R7A_021
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UCGA
- Length
- 4 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7R7A_021 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.2114
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7R7A|1|1|U|873
7R7A|1|1|C|886
7R7A|1|1|G|887
7R7A|1|1|A|888
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 8
- NOC2 isoform 1
- Chain I
- Nucleolar complex-associated protein 3
- Chain l
- 60S ribosome subunit biogenesis protein NIP7
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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