HL_7RGU_003

3D structure

PDB id

7RGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of RocC bound to a transcriptional terminator

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UCUUCGGA

Length

8 nucleotides

Bulged bases (A, C, G, U)

12U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_66421.1

Basepair signature

cWW-cWS-F-F

Number of instances in this motif group

7

Unit IDs

7RGU|1|F|U|9
7RGU|1|F|C|10
7RGU|1|F|U|11
7RGU|1|F|U|12
7RGU|1|F|C|13
7RGU|1|F|G|14
7RGU|1|F|G|15
7RGU|1|F|A|16

Current chains

Chain F

Modified SL3 of RocR

Nearby chains

Chain E

Repressor of competence, RNA Chaperone