3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
UAUUGAAGCA
Length
10 nucleotides
Bulged bases
7RQB|1|1A|C|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
T-loop with 2 stacked bulged bases
Broad Annotation
T-loop
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

7RQB|1|1A|U|566
7RQB|1|1A|A|567
7RQB|1|1A|U|568
7RQB|1|1A|U|569
7RQB|1|1A|G|570
7RQB|1|1A|A|571
7RQB|1|1A|A|572
7RQB|1|1A|G|573
7RQB|1|1A|C|574
7RQB|1|1A|A|575

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 15
50S ribosomal protein L32
Chain 1E
50S ribosomal protein L3
Chain 1P
50S ribosomal protein L15
Chain 1V
50S ribosomal protein L21

Coloring options:

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