HL_7RQB_023

3D structure

PDB id

7RQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.45 Å

Loop

Sequence

GGAUGCAAAC

Length

10 nucleotides

Bulged bases

7RQB|1|1A|U|747, 7RQB|1|1A|A|751, 7RQB|1|1A|A|752

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.6

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

6

Unit IDs

7RQB|1|1A|G|744
7RQB|1|1A|G|745
7RQB|1|1A|A|746
7RQB|1|1A|U|747
7RQB|1|1A|G|748
7RQB|1|1A|C|749
7RQB|1|1A|A|750
7RQB|1|1A|A|751
7RQB|1|1A|A|752
7RQB|1|1A|C|753

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L32

Chain 17

50S ribosomal protein L34

Chain 1E

50S ribosomal protein L3

Chain 1W

50S ribosomal protein L22