3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
UUUACCAAAAA
Length
11 nucleotides
Bulged bases
7RQB|1|1A|A|1780, 7RQB|1|1A|C|1781, 7RQB|1|1A|C|1782, 7RQB|1|1A|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_43613.5
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

7RQB|1|1A|U|1777
7RQB|1|1A|U|1778
7RQB|1|1A|U|1779
7RQB|1|1A|A|1780
7RQB|1|1A|C|1781
7RQB|1|1A|C|1782
7RQB|1|1A|A|1783
7RQB|1|1A|A|1784
7RQB|1|1A|A|1785
7RQB|1|1A|A|1786
7RQB|1|1A|A|1787

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 17
50S ribosomal protein L34
Chain 1D
50S ribosomal protein L2
Chain 1W
50S ribosomal protein L22

Coloring options:

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