3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
7RQB|1|1A|G|2751, 7RQB|1|1A|C|2755
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_56677.7
Basepair signature
cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
8

Unit IDs

7RQB|1|1A|C|2745
7RQB|1|1A|U|2746
7RQB|1|1A|G|2747
7RQB|1|1A|A|2748
7RQB|1|1A|A|2749
7RQB|1|1A|A|2750
7RQB|1|1A|G|2751
7RQB|1|1A|C|2752
7RQB|1|1A|A|2753
7RQB|1|1A|U|2754
7RQB|1|1A|C|2755
7RQB|1|1A|U|2756
7RQB|1|1A|A|2757
7RQB|1|1A|A|2758
7RQB|1|1A|G|2759

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 19
50S ribosomal protein L36
Chain 1H
50S ribosomal protein L6
Chain 1N
50S ribosomal protein L13

Coloring options:

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