HL_7RQC_050

3D structure

PDB id

7RQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CCUCCGGG

Length

8 nucleotides

Bulged bases

7RQC|1|1A|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RQC_050 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3619

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7RQC|1|1A|C|2142
7RQC|1|1A|C|2143
7RQC|1|1A|U|2144
7RQC|1|1A|C|2145
7RQC|1|1A|C|2146
7RQC|1|1A|G|2147
7RQC|1|1A|G|2148
7RQC|1|1A|G|2149

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains