HL_7RR5_001
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CAGUUGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7RR5|1|A|U|16, 7RR5|1|A|U|17, 7RR5|1|A|G|18, 7RR5|1|A|G|19, 7RR5|1|A|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_001 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.2477
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7RR5|1|A|C|13
7RR5|1|A|A|14
7RR5|1|A|G|15
7RR5|1|A|U|16
7RR5|1|A|U|17
7RR5|1|A|G|18
7RR5|1|A|G|19
7RR5|1|A|U|20
7RR5|1|A|A|21
7RR5|1|A|G|22
Current chains
- Chain A
- A-tRNA
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- RPL10 isoform 1
- Chain P
- Transfer RNA; tRNA
Coloring options: