HL_7RR5_009

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAUAG

Length

5 nucleotides

Bulged bases

7RR5|1|C1|U|210, 7RR5|1|C1|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_009 not in the Motif Atlas

Homologous match to HL_5TBW_006

Geometric discrepancy: 0.1198

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7RR5|1|C1|C|208
7RR5|1|C1|A|209
7RR5|1|C1|U|210
7RR5|1|C1|A|211
7RR5|1|C1|G|212

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LC

RPL4A isoform 1

Chain LY

60S ribosomal protein L26-A