HL_7RR5_027

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7RR5|1|C1|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_027 not in the Motif Atlas

Homologous match to HL_8C3A_024

Geometric discrepancy: 0.1141

The information below is about HL_8C3A_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7RR5|1|C1|C|1076
7RR5|1|C1|U|1077
7RR5|1|C1|U|1078
7RR5|1|C1|A|1079
7RR5|1|C1|A|1080
7RR5|1|C1|U|1081
7RR5|1|C1|U|1082
7RR5|1|C1|G|1083

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LD

RPL5 isoform 1

Chain LT

60S ribosomal protein L21-A

Chain Lb

RPL29 isoform 1