HL_7RR5_088

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

7RR5|1|C2|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_088 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2601

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7RR5|1|C2|C|491
7RR5|1|C2|A|492
7RR5|1|C2|U|493
7RR5|1|C2|U|494
7RR5|1|C2|C|495
7RR5|1|C2|G|496

Current chains

Chain C2

18S rRNA

Nearby chains