HL_7RR5_098
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7RR5|1|C2|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_098 not in the Motif Atlas
- Homologous match to HL_4V88_208
- Geometric discrepancy: 0.1523
- The information below is about HL_4V88_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
7RR5|1|C2|G|997
7RR5|1|C2|A|998
7RR5|1|C2|U|999
7RR5|1|C2|C|1000
7RR5|1|C2|A|1001
7RR5|1|C2|G|1002
7RR5|1|C2|A|1003
7RR5|1|C2|U|1004
7RR5|1|C2|A|1005
7RR5|1|C2|C|1006
7RR5|1|C2|C|1007
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- Transfer RNA; tRNA
- Chain SO
- 40S ribosomal protein S14-B
- Chain Sa
- RPS26B isoform 1
- Chain m
- mRNA
Coloring options: