HL_7RR5_109
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- AUUGUAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 7RR5|1|C2|U|1557, 7RR5|1|C2|U|1558, 7RR5|1|C2|A|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_109 not in the Motif Atlas
- Homologous match to HL_4V88_219
- Geometric discrepancy: 0.16
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7RR5|1|C2|A|1550
7RR5|1|C2|U|1551
7RR5|1|C2|U|1552
7RR5|1|C2|G|1553
7RR5|1|C2|U|1554
7RR5|1|C2|A|1555
7RR5|1|C2|A|1556
7RR5|1|C2|U|1557
7RR5|1|C2|U|1558
7RR5|1|C2|A|1559
7RR5|1|C2|U|1560
7RR5|1|C2|U|1561
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SP
- RPS15 isoform 1
- Chain SS
- 40S ribosomal protein S18-B
- Chain ST
- 40S ribosomal protein S19-A
- Chain Sd
- RPS29A isoform 1
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