HL_7RYG_050

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7RYG|1|A|A|2264, 7RYG|1|A|C|2271

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_050 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.097

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7RYG|1|A|C|2260
7RYG|1|A|U|2261
7RYG|1|A|A|2262
7RYG|1|A|A|2263
7RYG|1|A|A|2264
7RYG|1|A|G|2265
7RYG|1|A|A|2266
7RYG|1|A|G|2267
7RYG|1|A|U|2268
7RYG|1|A|A|2269
7RYG|1|A|A|2270
7RYG|1|A|C|2271
7RYG|1|A|G|2272

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L16

Chain V

50S ribosomal protein L27