HL_7RYG_055

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UGUAUGGAAG

Length

10 nucleotides

Bulged bases

7RYG|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_055 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0847

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7RYG|1|A|U|2400
7RYG|1|A|G|2401
7RYG|1|A|U|2402
7RYG|1|A|A|2403
7RYG|1|A|U|2404
7RYG|1|A|G|2405
7RYG|1|A|G|2406
7RYG|1|A|A|2407
7RYG|1|A|A|2408
7RYG|1|A|G|2409

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15