HL_7RYG_088
3D structure
- PDB id
- 7RYG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GAU(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 7RYG|1|a|A|965, 7RYG|1|a|G|968
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RYG_088 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1618
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7RYG|1|a|G|960
7RYG|1|a|A|961
7RYG|1|a|U|962
7RYG|1|a|2MG|963
7RYG|1|a|5MC|964
7RYG|1|a|A|965
7RYG|1|a|A|966
7RYG|1|a|C|967
7RYG|1|a|G|968
7RYG|1|a|C|969
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain v
- Transfer RNA; tRNA
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