HL_7RYH_006

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7RYH|1|A|A|203, 7RYH|1|A|A|206

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.1084

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7RYH|1|A|G|201
7RYH|1|A|A|202
7RYH|1|A|A|203
7RYH|1|A|A|204
7RYH|1|A|C|205
7RYH|1|A|A|206
7RYH|1|A|U|207
7RYH|1|A|C|208

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15

Chain W

50S ribosomal protein L28