3D structure

PDB id
7RYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.43 Å

Loop

Sequence
UUUAUUAAAAA
Length
11 nucleotides
Bulged bases
7RYH|1|A|A|1776, 7RYH|1|A|U|1777, 7RYH|1|A|U|1778, 7RYH|1|A|A|1782
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7RYH_043 not in the Motif Atlas
Homologous match to HL_5J7L_178
Geometric discrepancy: 0.0945
The information below is about HL_5J7L_178
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_01962.2
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

7RYH|1|A|U|1773
7RYH|1|A|U|1774
7RYH|1|A|U|1775
7RYH|1|A|A|1776
7RYH|1|A|U|1777
7RYH|1|A|U|1778
7RYH|1|A|A|1779
7RYH|1|A|A|1780
7RYH|1|A|A|1781
7RYH|1|A|A|1782
7RYH|1|A|A|1783

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L34
Chain C
50S ribosomal protein L2

Coloring options:


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