HL_7RYH_050

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7RYH|1|A|A|2264, 7RYH|1|A|C|2271

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_050 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0959

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7RYH|1|A|C|2260
7RYH|1|A|U|2261
7RYH|1|A|A|2262
7RYH|1|A|A|2263
7RYH|1|A|A|2264
7RYH|1|A|G|2265
7RYH|1|A|A|2266
7RYH|1|A|G|2267
7RYH|1|A|U|2268
7RYH|1|A|A|2269
7RYH|1|A|A|2270
7RYH|1|A|C|2271
7RYH|1|A|G|2272

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L16

Chain V

50S ribosomal protein L27