HL_7RYH_051

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GGUCGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_051 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.4022

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7RYH|1|A|G|2299
7RYH|1|A|G|2300
7RYH|1|A|U|2301
7RYH|1|A|C|2302
7RYH|1|A|G|2303
7RYH|1|A|G|2304
7RYH|1|A|A|2305
7RYH|1|A|A|2306
7RYH|1|A|A|2307
7RYH|1|A|U|2308
7RYH|1|A|C|2309

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5