HL_7RYH_070

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_070 not in the Motif Atlas

Homologous match to HL_5J7L_003

Geometric discrepancy: 0.2081

The information below is about HL_5J7L_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7RYH|1|a|C|154
7RYH|1|a|G|155
7RYH|1|a|A|156
7RYH|1|a|A|157
7RYH|1|a|A|158
7RYH|1|a|G|159

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L19

Chain t

30S ribosomal protein S20