HL_7RYH_073

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GGUAAAGGC

Length

9 nucleotides

Bulged bases

7RYH|1|a|G|262

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_073 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1353

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7RYH|1|a|G|255
7RYH|1|a|G|256
7RYH|1|a|U|257
7RYH|1|a|A|258
7RYH|1|a|A|259
7RYH|1|a|A|260
7RYH|1|a|G|261
7RYH|1|a|G|262
7RYH|1|a|C|263

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20