HL_7S0S_009

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

AUGUGAUACCGGGUAGGGGUUGU

Length

23 nucleotides

Bulged bases

7S0S|1|C|U|285, 7S0S|1|C|U|288

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_009 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1736

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7S0S|1|C|A|282
7S0S|1|C|U|283
7S0S|1|C|G|284
7S0S|1|C|U|285
7S0S|1|C|G|286
7S0S|1|C|A|287
7S0S|1|C|U|288
7S0S|1|C|A|289
7S0S|1|C|C|290
7S0S|1|C|C|291
7S0S|1|C|G|292
7S0S|1|C|G|293
7S0S|1|C|G|294
7S0S|1|C|U|295
7S0S|1|C|A|296
7S0S|1|C|G|297
7S0S|1|C|G|298
7S0S|1|C|G|299
7S0S|1|C|G|300
7S0S|1|C|U|301
7S0S|1|C|U|302
7S0S|1|C|G|303
7S0S|1|C|U|304

Current chains

Chain C

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L9