HL_7S0S_010

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUCUACCUGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_010 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3578

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7S0S|1|C|C|336
7S0S|1|C|U|337
7S0S|1|C|C|338
7S0S|1|C|U|339
7S0S|1|C|A|340
7S0S|1|C|C|341
7S0S|1|C|C|342
7S0S|1|C|U|343
7S0S|1|C|G|344
7S0S|1|C|G|345

Current chains

Chain C

23S rRNA

Nearby chains