HL_7S0S_017

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGGGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_017 not in the Motif Atlas

Homologous match to HL_7RQB_016

Geometric discrepancy: 0.0828

The information below is about HL_7RQB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7S0S|1|C|C|575
7S0S|1|C|G|576
7S0S|1|C|G|577
7S0S|1|C|G|578
7S0S|1|C|A|579
7S0S|1|C|G|580

Current chains

Chain C

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L22