HL_7S0S_020

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGGGUG

Length

6 nucleotides

Bulged bases

7S0S|1|C|G|707

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_020 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2524

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7S0S|1|C|C|705
7S0S|1|C|G|706
7S0S|1|C|G|707
7S0S|1|C|G|708
7S0S|1|C|U|709
7S0S|1|C|G|710

Current chains

Chain C

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L4