HL_7S0S_021

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_021 not in the Motif Atlas

Homologous match to HL_7A0S_020

Geometric discrepancy: 0.0797

The information below is about HL_7A0S_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7S0S|1|C|C|723
7S0S|1|C|G|724
7S0S|1|C|A|725
7S0S|1|C|A|726
7S0S|1|C|A|727
7S0S|1|C|G|728

Current chains

Chain C

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L15

Chain f

50S ribosomal protein L35