HL_7S0S_030

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_030 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.0986

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7S0S|1|C|G|1096
7S0S|1|C|A|1097
7S0S|1|C|A|1098
7S0S|1|C|A|1099
7S0S|1|C|C|1100
7S0S|1|C|A|1101
7S0S|1|C|G|1102
7S0S|1|C|C|1103

Current chains

Chain C

23S rRNA

Nearby chains

Chain 3

ribosomal protein bL37

Chain b

50S ribosomal protein L30