HL_7S0S_031

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7S0S|1|C|A|1188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_031 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.5898

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7S0S|1|C|C|1182
7S0S|1|C|U|1183
7S0S|1|C|U|1184
7S0S|1|C|A|1185
7S0S|1|C|G|1186
7S0S|1|C|A|1187
7S0S|1|C|A|1188
7S0S|1|C|G|1189
7S0S|1|C|C|1190
7S0S|1|C|A|1191
7S0S|1|C|G|1192

Current chains

Chain C

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L11

Chain O

50S ribosomal protein L16