HL_7S0S_038

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7S0S|1|C|U|1511, 7S0S|1|C|U|1512

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_038 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1007

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7S0S|1|C|G|1504
7S0S|1|C|U|1505
7S0S|1|C|U|1506
7S0S|1|C|G|1507
7S0S|1|C|A|1508
7S0S|1|C|U|1509
7S0S|1|C|A|1510
7S0S|1|C|U|1511
7S0S|1|C|U|1512
7S0S|1|C|C|1513

Current chains

Chain C

23S rRNA

Nearby chains

Chain V

50S ribosomal protein L23