HL_7S0S_039

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUUUCGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_039 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2211

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7S0S|1|C|C|1582
7S0S|1|C|U|1583
7S0S|1|C|U|1584
7S0S|1|C|U|1585
7S0S|1|C|C|1586
7S0S|1|C|G|1587
7S0S|1|C|G|1588
7S0S|1|C|G|1589

Current chains

Chain C

23S rRNA

Nearby chains

Chain B

16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA