HL_7S0S_057

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7S0S|1|C|G|2474

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_057 not in the Motif Atlas

Homologous match to HL_5J7L_186

Geometric discrepancy: 0.0946

The information below is about HL_5J7L_186

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7S0S|1|C|C|2472
7S0S|1|C|U|2473
7S0S|1|C|G|2474
7S0S|1|C|G|2475
7S0S|1|C|G|2476
7S0S|1|C|G|2477
7S0S|1|C|C|2478
7S0S|1|C|G|2479
7S0S|1|C|G|2480

Current chains

Chain C

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27