HL_7S0S_072

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GCAGACCAC

Length

9 nucleotides

Bulged bases

7S0S|1|C|C|3041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_072 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.093

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7S0S|1|C|G|3040
7S0S|1|C|C|3041
7S0S|1|C|A|3042
7S0S|1|C|G|3043
7S0S|1|C|A|3044
7S0S|1|C|C|3045
7S0S|1|C|C|3046
7S0S|1|C|A|3047
7S0S|1|C|C|3048

Current chains

Chain C

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L3

Chain P

50S ribosomal protein L17