HL_7S0S_078
3D structure
- PDB id
- 7S0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GUCCCAUCCCGAACC
- Length
- 15 nucleotides
- Bulged bases
- 7S0S|1|i|C|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7S0S_078 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.1544
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.3
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7S0S|1|i|G|35
7S0S|1|i|U|36
7S0S|1|i|C|37
7S0S|1|i|C|38
7S0S|1|i|C|39
7S0S|1|i|A|40
7S0S|1|i|U|41
7S0S|1|i|C|42
7S0S|1|i|C|43
7S0S|1|i|C|44
7S0S|1|i|G|45
7S0S|1|i|A|46
7S0S|1|i|A|47
7S0S|1|i|C|48
7S0S|1|i|C|49
Current chains
- Chain i
- 5S rRNA
Nearby chains
- Chain C
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 50S ribosomal protein L5
- Chain Q
- 50S ribosomal protein L18
- Chain h
- 50S ribosomal protein L31
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