HL_7S1H_012

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7S1H|1|C|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1408

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7S1H|1|C|G|462
7S1H|1|C|U|463
7S1H|1|C|U|464
7S1H|1|C|A|465
7S1H|1|C|A|466
7S1H|1|C|U|467
7S1H|1|C|A|468
7S1H|1|C|C|469
7S1H|1|C|C|470

Current chains

Chain C

16S rRNA

Nearby chains