HL_7S1H_026

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

7S1H|1|C|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_026 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.2571

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

7S1H|1|C|G|1134
7S1H|1|C|U|1135
7S1H|1|C|C|1136
7S1H|1|C|C|1137
7S1H|1|C|G|1138
7S1H|1|C|G|1139
7S1H|1|C|C|1140

Current chains

Chain C

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S9