HL_7S1H_060

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7S1H|1|I|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_060 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2658

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7S1H|1|I|C|1064
7S1H|1|I|U|1065
7S1H|1|I|U|1066
7S1H|1|I|A|1067
7S1H|1|I|G|1068
7S1H|1|I|A|1069
7S1H|1|I|A|1070
7S1H|1|I|G|1071
7S1H|1|I|C|1072
7S1H|1|I|A|1073
7S1H|1|I|G|1074

Current chains

Chain I

23S rRNA

Nearby chains