HL_7S1H_067

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7S1H|1|I|U|1396, 7S1H|1|I|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_067 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.133

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7S1H|1|I|G|1389
7S1H|1|I|U|1390
7S1H|1|I|U|1391
7S1H|1|I|A|1392
7S1H|1|I|A|1393
7S1H|1|I|U|1394
7S1H|1|I|A|1395
7S1H|1|I|U|1396
7S1H|1|I|U|1397
7S1H|1|I|C|1398

Current chains

Chain I

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L23