HL_7S1H_085

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7S1H|1|I|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_085 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0735

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1H|1|I|C|2248
7S1H|1|I|U|2249
7S1H|1|I|G|2250
7S1H|1|I|OMG|2251
7S1H|1|I|G|2252
7S1H|1|I|G|2253
7S1H|1|I|C|2254
7S1H|1|I|G|2255
7S1H|1|I|G|2256

Current chains

Chain I

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L16

Chain e

50S ribosomal protein L27