HL_7S1H_102
3D structure
- PDB id
- 7S1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 7S1H|1|J|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7S1H_102 not in the Motif Atlas
- Homologous match to HL_7RQB_070
- Geometric discrepancy: 0.109
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7S1H|1|J|C|38
7S1H|1|J|A|39
7S1H|1|J|U|40
7S1H|1|J|G|41
7S1H|1|J|C|42
7S1H|1|J|C|43
7S1H|1|J|G|44
Current chains
- Chain J
- 5S rRNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- 50S ribosomal protein L5
- Chain Q
- 50S ribosomal protein L31
- Chain W
- 50S ribosomal protein L18
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