HL_7S1J_048

3D structure

PDB id

7S1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

7S1J|1|I|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1J_048 not in the Motif Atlas

Homologous match to HL_7RQB_017

Geometric discrepancy: 0.4503

The information below is about HL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1J|1|I|C|544
7S1J|1|I|U|545
7S1J|1|I|U|546
7S1J|1|I|A|547
7S1J|1|I|G|548
7S1J|1|I|G|549

Current chains

Chain I

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L13