HL_7S1J_094

3D structure

PDB id

7S1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1J_094 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.0904

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7S1J|1|I|C|2551
7S1J|1|I|OMU|2552
7S1J|1|I|G|2553
7S1J|1|I|U|2554
7S1J|1|I|U|2555
7S1J|1|I|C|2556
7S1J|1|I|G|2557

Current chains

Chain I

23S rRNA

Nearby chains