HL_7S1K_001
3D structure
- PDB id
- 7S1K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CUCAGUAGGUAGAG
- Length
- 14 nucleotides
- Bulged bases
- 7S1K|1|A|A|17, 7S1K|1|A|G|18, 7S1K|1|A|G|19, 7S1K|1|A|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7S1K_001 not in the Motif Atlas
- Homologous match to HL_4WT8_218
- Geometric discrepancy: 0.4909
- The information below is about HL_4WT8_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7S1K|1|A|C|11
7S1K|1|A|U|12
7S1K|1|A|C|13
7S1K|1|A|A|14
7S1K|1|A|G|15
7S1K|1|A|U|16
7S1K|1|A|A|17
7S1K|1|A|G|18
7S1K|1|A|G|19
7S1K|1|A|U|20
7S1K|1|A|A|21
7S1K|1|A|G|22
7S1K|1|A|A|23
7S1K|1|A|G|24
Current chains
- Chain A
- tRNA(PHE)
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- 50S ribosomal protein L5
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