3D structure

PDB id
7S1K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
CGCCAG
Length
6 nucleotides
Bulged bases
7S1K|1|I|C|2145
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7S1K_086 not in the Motif Atlas
Homologous match to HL_5J7L_184
Geometric discrepancy: 0.3661
The information below is about HL_5J7L_184
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_79299.1
Basepair signature
cWW-tSW-R
Number of instances in this motif group
44

Unit IDs

7S1K|1|I|C|2143
7S1K|1|I|G|2144
7S1K|1|I|C|2145
7S1K|1|I|C|2146
7S1K|1|I|A|2147
7S1K|1|I|G|2148

Current chains

Chain I
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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