HL_7S9U_002
3D structure
- PDB id
- 7S9U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 44SR3C ribosomal particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAAGCAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7S9U_002 not in the Motif Atlas
- Homologous match to HL_4WF9_002
- Geometric discrepancy: 0.3922
- The information below is about HL_4WF9_002
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_00911.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7S9U|1|A|U|87
7S9U|1|A|G|88
7S9U|1|A|U|89
7S9U|1|A|A|90
7S9U|1|A|A|91
7S9U|1|A|G|92
7S9U|1|A|C|93
7S9U|1|A|A|94
7S9U|1|A|A|95
Current chains
- Chain A
- RNA (2436-MER)
Nearby chains
- Chain T
- 50S ribosomal protein L23
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
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