HL_7S9U_013

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AACACGUGAAAUU

Length

13 nucleotides

Bulged bases

7S9U|1|A|G|433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_013 not in the Motif Atlas

Homologous match to HL_4WF9_013

Geometric discrepancy: 0.3108

The information below is about HL_4WF9_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69139.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7S9U|1|A|A|428
7S9U|1|A|A|429
7S9U|1|A|C|430
7S9U|1|A|A|431
7S9U|1|A|C|432
7S9U|1|A|G|433
7S9U|1|A|U|434
7S9U|1|A|G|435
7S9U|1|A|A|436
7S9U|1|A|A|437
7S9U|1|A|A|438
7S9U|1|A|U|439
7S9U|1|A|U|440

Current chains

Chain A

RNA (2436-MER)

Nearby chains