HL_7S9U_014

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7S9U|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_014 not in the Motif Atlas

Geometric match to HL_4GXY_003

Geometric discrepancy: 0.3615

The information below is about HL_4GXY_003

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_65794.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7S9U|1|A|G|457
7S9U|1|A|G|458
7S9U|1|A|A|459
7S9U|1|A|C|460
7S9U|1|A|C|461
7S9U|1|A|A|462
7S9U|1|A|U|463
7S9U|1|A|C|464

Current chains

Chain A

RNA (2436-MER)

Nearby chains