HL_7S9U_050

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUAUCG

Length

7 nucleotides

Bulged bases

7S9U|1|A|U|2240, 7S9U|1|A|U|2242

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_050 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.1882

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7S9U|1|A|C|2238
7S9U|1|A|U|2239
7S9U|1|A|U|2240
7S9U|1|A|A|2241
7S9U|1|A|U|2242
7S9U|1|A|C|2243
7S9U|1|A|G|2244

Current chains

Chain A

RNA (2436-MER)

Nearby chains