HL_7S9U_055

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUACAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_055 not in the Motif Atlas

Homologous match to HL_7RQB_057

Geometric discrepancy: 0.2756

The information below is about HL_7RQB_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53619.1

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

7S9U|1|A|C|2384
7S9U|1|A|C|2385
7S9U|1|A|U|2386
7S9U|1|A|A|2387
7S9U|1|A|C|2388
7S9U|1|A|A|2389
7S9U|1|A|A|2390
7S9U|1|A|G|2391

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain L

50S ribosomal protein L15

Chain V

50S ribosomal protein L27